PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA33G00296
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family B3
Protein Properties Length: 217aa    MW: 25404.1 Da    PI: 6.534
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA33G00296genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.95.6e-1190172276
                 EEE-..-HHHHT.T-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--T CS
          B3   2 fkvltpsdvlks.grlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLke 76 
                  k+lt sdv+   grl+l kk +++         +++  e++++ ++ ++g+++e+k+++++k  + vl++GW++Fv++ +L+ 
  AA33G00296  90 HKQLTESDVNGGqGRLMLEKKEVNDKflsrlqknEIPGVEGVDVLVYGPNGKVYEMKFKIWNKN-TPVLANGWSKFVEDYELEK 172
                 58999999987769********9888999887764444499*****************999985.789************9985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF037548.9E-687166IPR005508B3 domain-containing protein
CDDcd100178.65E-1387171No hitNo description
SuperFamilySSF1019367.46E-1388172IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.3E-1289172IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508638.50190198IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MAENYPPDHE IKEDPQEYSN SDEIKEDKCE VGDKNPKLVI KKRKIVEEED KTQETLKLRL  60
ERIIKNKNGD QPEIPPAHII GISHYGKCIH KQLTESDVNG GQGRLMLEKK EVNDKFLSRL  120
QKNEIPGVEG VDVLVYGPNG KVYEMKFKIW NKNTPVLANG WSKFVEDYEL EKYRNVIKIW  180
MFKAWKDGQI CFAIDSLRFD DITYPLNKRI FKDIFES
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13543PKLVIKKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM21031835
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.13e-32B3 family protein